BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016A07SP1|AL426941
(816 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1630 1597 0.0
>3x_Contig1630
Length = 14771
Score = 1597 bits (805), Expect = 0.0
Identities = 813/815 (99%), Gaps = 1/815 (0%)
Strand = Plus / Plus
Query: 3 agtcatctaaaaacattgcgttgctatctggttcttcactccggctttgctttgacagat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2813 agtcatctaaaaacattgcgttgctatctggttcttcactccggctttgctttgacagat 2872
Query: 63 tcaaaccggttcttgtttcaccttgtgtcgtcgtttcattgtatgggattttccataact 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2873 tcaaaccggttcttgtttcaccttgtgtcgtcgtttcattgtatgggattttccataact 2932
Query: 123 ttggatgctttttttttcctgattcaattttgaagccgtttttgagccattttgaagttc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2933 ttggatgctttttttttcctgattcaattttgaagccgtttttgagccattttgaagttc 2992
Query: 183 gaaaataaaaaaaaaaggtaactaccagaacttggcgtaggttttatgagccgtgcgcaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2993 gaaaataaaaaaaaaaggtaactaccagaacttggcgtaggttttatgagccgtgcgcaa 3052
Query: 243 agtgggaggtatattatgatggagtactggataatagcatcccaaattgccgacgatatc 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3053 agtgggaggtatattatgatggagtactggataatagcatcccaaattgccgacgatatc 3112
Query: 303 ataaaatatattccgtttgggtaagacccagtaacgtgggcgtagaattaatgaaggaaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3113 ataaaatatattccgtttgggtaagacccagtaacgtgggcgtagaattaatgaaggaaa 3172
Query: 363 aaaaaaaagcacaaatggcattaccatgtaaggaatggctaaacaggtaaggccgta-gg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 3173 aaaaaaaagcacaaatggcattaccatgtaaggaatggctaaacaggtaaggccgtaggg 3232
Query: 422 ttttggttccagaatgcaagtttgcgaacattggcagtataggcttgcccagctgtcatt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3233 ttttggttccagaatgcaagtttgcgaacattggcagtataggcttgcccagctgtcatt 3292
Query: 482 ccgttctgaattgtgaagtggggtttggacagataaaggaaggggcaaggcagggcagtg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3293 ccgttctgaattgtgaagtggggtttggacagataaaggaaggggcaaggcagggcagtg 3352
Query: 542 ctaattccagcccaaacttgaccggcgttagtactctggttaggccatgtaccatttacc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3353 ctaattccagcccaaacttgaccggcgttagtactctggttaggccatgtaccatttacc 3412
Query: 602 ttgtgccttacttcgcagctgcaacaagggtgaggaaaattgaaaattaagcttcttgag 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3413 ttgtgccttacttcgcagctgcaacaagggtgaggaaaattgaaaattaagcttcttgag 3472
Query: 662 cttctcaagcactctaaaactgggacggaatggtccgactcggagttgcgttgttttttt 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3473 cttctcaagcactctaaaactgggacggaatggtccgactcggagttgcgttgttttttt 3532
Query: 722 ttttctttccactcaggtaggttttacccggtctttttttttttttttccattcctcttt 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3533 ttttctttccactcaggtaggttttacccggtctttttttttttttttccattcctcttt 3592
Query: 782 ggttgtgttaraactgactcaaggctcgagcgttt 816
|||||||||| ||||||||||||||||||||||||
Sbjct: 3593 ggttgtgttagaactgactcaaggctcgagcgttt 3627
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 27,857
Number of Sequences: 1807
Number of extensions: 27857
Number of successful extensions: 2434
Number of sequences better than 1.0e-20: 1
length of query: 816
length of database: 10,358,551
effective HSP length: 16
effective length of query: 800
effective length of database: 10,329,639
effective search space: 8263711200
effective search space used: 8263711200
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)